File dataformat.hxx¶
Generic interface for file formats e.g. netCDF.
Copyright 2010 B.D.Dudson, S.Farley, M.V.Umansky, X.Q.Xu
- Author
B.Dudson
- Date
April 2009
Contact Ben Dudson, bd512@york.ac.uk
This file is part of BOUT++.
BOUT++ is free software: you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
BOUT++ is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public License along with BOUT++. If not, see http://www.gnu.org/licenses/.
Functions
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std::unique_ptr<DataFormat> data_format(const char *filename = nullptr)¶
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class DataFormat¶
Subclassed by PncFormat
Public Functions
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virtual ~DataFormat() = default¶
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virtual bool openr(const char *name) = 0¶
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virtual bool openw(const char *name, bool append = false) = 0¶
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virtual bool is_valid() = 0¶
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virtual void close() = 0¶
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virtual void flush() = 0¶
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virtual bool setGlobalOrigin(int x = 0, int y = 0, int z = 0) = 0¶
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virtual bool setLocalOrigin(int x = 0, int y = 0, int z = 0, int offset_x = 0, int offset_y = 0, int offset_z = 0)¶
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virtual bool setRecord(int t) = 0¶
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virtual bool read(int *var, const char *name, int lx = 1, int ly = 0, int lz = 0) = 0¶
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virtual bool read(char *var, const char *name, int n = 1) = 0¶
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virtual bool write(int *var, const char *name, int lx = 0, int ly = 0, int lz = 0) = 0¶
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virtual bool write(char *var, const char *name, int n = 1) = 0¶
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virtual bool read_rec(int *var, const char *name, int lx = 1, int ly = 0, int lz = 0) = 0¶
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virtual bool read_rec(char *var, const char *name, int n = 1) = 0¶
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virtual bool read_rec(BoutReal *var, const std::string &name, int lx = 1, int ly = 0, int lz = 0) = 0¶
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virtual bool write_rec(int *var, const char *name, int lx = 0, int ly = 0, int lz = 0) = 0¶
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virtual bool write_rec(char *var, const char *name, int n = 1) = 0¶
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virtual bool write_rec(BoutReal *var, const std::string &name, int lx = 0, int ly = 0, int lz = 0) = 0¶
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inline virtual void setLowPrecision()¶
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virtual void setAttribute(const std::string &varname, const std::string &attrname, const std::string &text) = 0¶
Sets a string attribute
Inputs
- Parameters
varname – [in] Variable name. The variable must already exist. If varname is the empty string “” then the attribute will be added to the file instead of to a variable.
attrname – [in] Attribute name
text – [in] A string attribute to attach to the variable
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virtual void setAttribute(const std::string &varname, const std::string &attrname, int value) = 0¶
Sets an integer attribute
Inputs
- Parameters
varname – [in] Variable name. The variable must already exist. If varname is the empty string “” then the attribute will be added to the file instead of to a variable.
attrname – [in] Attribute name
value – [in] An int attribute to attach to the variable
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virtual void setAttribute(const std::string &varname, const std::string &attrname, BoutReal value) = 0¶
Sets a BoutReal attribute
Inputs
- Parameters
varname – [in] Variable name. The variable must already exist. If varname is the empty string “” then the attribute will be added to the file instead of to a variable.
attrname – [in] Attribute name
value – [in] A BoutReal attribute to attach to the variable
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virtual bool getAttribute(const std::string &varname, const std::string &attrname, std::string &text) = 0¶
Gets a string attribute
Inputs
Returns
text A string attribute of the variable
- Parameters
varname – [in] Variable name. The variable must already exist. If varname is the empty string “” then get the attribute from the top-level of the file instead of from a variable.
attrname – [in] Attribute name
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virtual bool getAttribute(const std::string &varname, const std::string &attrname, int &value) = 0¶
Gets an integer attribute
Inputs
Returns
value An int attribute of the variable
- Parameters
varname – [in] Variable name. The variable must already exist. If varname is the empty string “” then get the attribute from the top-level of the file instead of from a variable.
attrname – [in] Attribute name
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virtual bool getAttribute(const std::string &varname, const std::string &attrname, BoutReal &value) = 0¶
Gets a BoutReal attribute
Inputs
Returns
value A BoutReal attribute of the variable
- Parameters
varname – [in] Variable name. The variable must already exist. If varname is the empty string “” then get the attribute from the top-level of the file instead of from a variable.
attrname – [in] Attribute name
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void writeFieldAttributes(const std::string &name, const Field &f, bool shiftOutput = false)¶
Write out the meta-data of a field as attributes of the variable.
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virtual ~DataFormat() = default¶